RGalaxy

DOI: 10.18129/B9.bioc.RGalaxy    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.14 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see RGalaxy.

Make an R function available in the Galaxy web platform

Bioconductor version: 3.14

Given an R function and its manual page, make the documented function available in Galaxy.

Author: Dan Tenenbaum

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RGalaxy")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RGalaxy")

 

HTML	R Script	Introduction to RGalaxy
PDF		Reference Manual

Details

biocViews	Infrastructure, Software
Version	1.38.0
In Bioconductor since	BioC 2.11 (R-2.15) (9.5 years)
License	Artistic-2.0
Depends	XML, methods, tools, optparse
Imports	BiocGenerics, Biobase, roxygen2
LinkingTo
Suggests	RUnit, hgu95av2.db, AnnotationDbi, knitr, formatR, Rserve, markdown
SystemRequirements
Enhances	RSclient
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RGalaxy_1.38.0.tar.gz
Windows Binary	RGalaxy_1.38.0.zip
macOS 10.13 (High Sierra)	RGalaxy_1.38.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/RGalaxy
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RGalaxy
Package Short Url	https://bioconductor.org/packages/RGalaxy/
Package Downloads Report	Download Stats