cytolib

DOI: 10.18129/B9.bioc.cytolib    

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see cytolib.

C++ infrastructure for representing and interacting with the gated cytometry data

Bioconductor version: 3.14

This package provides the core data structure and API to represent and interact with the gated cytometry data.

Author: Mike Jiang

Maintainer: Mike Jiang <mike at ozette.ai>

Installation

To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("cytolib")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cytolib")

 

HTML	R Script	Using cytolib
PDF		Reference Manual
Text		LICENSE

Details

biocViews	DataImport, DataRepresentation, FlowCytometry, ImmunoOncology, Preprocessing, Software
Version	2.6.2
In Bioconductor since	BioC 3.6 (R-3.4) (4.5 years)
License	file LICENSE
Depends	R (>= 3.4)
Imports	RcppParallel, RProtoBufLib
LinkingTo	Rcpp, BH (>= 1.75.0.0), RProtoBufLib(>= 2.3.5), Rhdf5lib, RcppArmadillo, RcppParallel (>= 4.4.2-1)
Suggests	knitr, rmarkdown
SystemRequirements	GNU make, C++11
Enhances
URL
Depends On Me
Imports Me	CytoML, flowCore, flowWorkspace
Suggests Me
Links To Me	CytoML, flowCore, flowWorkspace
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	cytolib_2.6.2.tar.gz
Windows Binary	cytolib_2.6.2.zip (32- & 64-bit)
macOS 10.13 (High Sierra)	cytolib_2.6.2.tgz
Source Repository	git clone https://git.bioconductor.org/packages/cytolib
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/cytolib
Package Short Url	https://bioconductor.org/packages/cytolib/
Package Downloads Report	Download Stats