ribor

DOI: 10.18129/B9.bioc.ribor    

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see ribor.

An R Interface for Ribo Files

Bioconductor version: 3.14

The ribor package provides an R Interface for .ribo files. It provides functionality to read the .ribo file, which is of HDF5 format, and performs common analyses on its contents.

Author: Michael Geng [cre, aut], Hakan Ozadam [aut], Can Cenik [aut]

Maintainer: Michael Geng <michaelgeng at utexas.edu>

Installation

To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ribor")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ribor")

 

HTML	R Script	A Walkthrough of RiboR
PDF		Reference Manual
Text		NEWS

Details

biocViews	Infrastructure, Software
Version	1.6.0
In Bioconductor since	BioC 3.11 (R-4.0) (2 years)
License	GPL-3
Depends	R (>= 3.6.0)
Imports	dplyr, ggplot2, hash, methods, rhdf5, rlang, stats, S4Vectors, tidyr, tools, yaml
LinkingTo
Suggests	testthat, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ribor_1.6.0.tar.gz
Windows Binary	ribor_1.6.0.zip (32- & 64-bit)
macOS 10.13 (High Sierra)	ribor_1.6.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ribor
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ribor
Package Short Url	https://bioconductor.org/packages/ribor/
Package Downloads Report	Download Stats