ChAMPdata

Data Packages for ChAMP package


Bioconductor version: Release (3.20)

Provides datasets needed for ChAMP including a test dataset and blood controls for CNA analysis.

Author: Yuan Tian [ctb,aut], Tiffany Morris [cre,aut], Lee Stirling [ctb] and Andrew Teschendorff [ctb]

Maintainer: Yuan Tian <champ450k at gmail.com>

Citation (from within R, enter citation("ChAMPdata")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ChAMPdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData
Version 2.38.0
License GPL-3
Depends R (>= 3.5.0), GenomicRanges(>= 1.22.4), BiocGenerics(>= 0.16.1)
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me ChAMP, methyLImp2
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ChAMPdata_2.38.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/ChAMPdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChAMPdata
Package Short Url https://bioconductor.org/packages/ChAMPdata/
Package Downloads Report Download Stats