DmelSGI
This package is for version 3.20 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see DmelSGI.
Experimental data and documented source code for the paper "A Map of Directional Genetic Interactions in a Metazoan Cell"
Bioconductor version: Release (3.20)
The package contains the experimental data and documented source code of the manuscript "Fischer et al., A Map of Directional Genetic Interactions in a Metazoan Cell, eLife, 2015, in Press.". The vignette code generates all figures in the paper.
Author: Bernd Fischer [aut], Wolfgang Huber [ctb], Mike Smith [cre]
Maintainer: Mike Smith <mike.smith at embl.de>
citation("DmelSGI")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("DmelSGI")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DmelSGI")| DmelSGI | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CellCulture, Drosophila_melanogaster_Data, ExperimentData, HighThroughputImagingData, HighthroughputImagingData, MicrotitrePlateAssayData, ReproducibleResearch |
| Version | 1.37.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.0) |
| Imports | grid, TSP, limma, rhdf5, knitr, abind, gplots, igraph, grDevices, graphics, stats |
| System Requirements | |
| URL |
See More
| Suggests | BiocStyle, EBImage, RColorBrewer, RNAinteractMAPK, hwriter, xtable, beeswarm |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | FeatSeekR |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | DmelSGI_1.37.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/DmelSGI |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/DmelSGI |
| Package Short Url | https://bioconductor.org/packages/DmelSGI/ |
| Package Downloads Report | Download Stats |