SingleMoleculeFootprintingData

Data supporting the SingleMoleculeFootprinting pkg

Bioconductor version: Release (3.20)

This Data package contains data objcets relevanat for the SingleMoleculeFootprinting package. More specifically, it contains one example of aligned sequencing data (.bam & .bai) necessary to run the SingleMoleculeFootprinting vignette. Additionally, we provide data that are essential for some functions to work correctly such as BaitCapture() and SampleCorrelation().

Author: Guido Barzaghi [aut, cre] , Arnaud Krebs [aut] , Mike Smith [ctb]

Maintainer: Guido Barzaghi <guido.barzaghi at embl.de>

Citation (from within R, enter citation("SingleMoleculeFootprintingData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SingleMoleculeFootprintingData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SingleMoleculeFootprintingData")

SingleMoleculeFootprintingData	HTML	R Script
Reference Manual	PDF
LICENSE	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, ExperimentHub, SequencingData
Version	1.14.0
License	GPL-3
Depends
Imports	ExperimentHub, utils
System Requirements
URL

Suggests	knitr, rmarkdown
Linking To
Enhances
Depends On Me
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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	SingleMoleculeFootprintingData_1.14.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/SingleMoleculeFootprintingData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/SingleMoleculeFootprintingData
Package Short Url	https://bioconductor.org/packages/SingleMoleculeFootprintingData/
Package Downloads Report	Download Stats