To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ArrayExpress")

In most cases, you don't need to download the package archive at all.

ArrayExpress

This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see ArrayExpress.

Access the ArrayExpress Microarray Database at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Bioconductor version: 3.3

Access the ArrayExpress Repository at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Author: Audrey Kauffmann, Ibrahim Emam, Michael Schubert

Maintainer: Ugis Sarkans <ugis at ebi.ac.uk>

Citation (from within R, enter citation("ArrayExpress")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ArrayExpress")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ArrayExpress")

PDF	R Script	ArrayExpress: Import and convert ArrayExpress data sets into R object
PDF		Reference Manual

biocViews	DataImport, Microarray, OneChannel, Software, TwoChannel
Version	1.32.0
In Bioconductor since	BioC 2.3 (R-2.8) (8 years)
License	Artistic-2.0
Depends	R (>= 2.9.0), Biobase(>= 2.4.0)
Imports	XML, oligo, limma
LinkingTo
Suggests	affy
SystemRequirements
Enhances
URL
Depends On Me	DrugVsDisease
Imports Me
Suggests Me	gCMAPWeb, Hiiragi2013
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	ArrayExpress_1.32.0.tar.gz
Windows Binary	ArrayExpress_1.32.0.zip
Mac OS X 10.9 (Mavericks)	ArrayExpress_1.32.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/ArrayExpress/tree/release-3.3
Package Short Url	http://bioconductor.org/packages/ArrayExpress/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: