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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CNORfuzzy")
In most cases, you don't need to download the package archive at all.
CNORfuzzy
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see CNORfuzzy.
Addon to CellNOptR: Fuzzy Logic
Bioconductor version: 3.3
This package is an extension to CellNOptR. It contains additional functionality needed to simulate and train a prior knowledge network to experimental data using constrained fuzzy logic (cFL, rather than Boolean logic as is the case in CellNOptR). Additionally, this package will contain functions to use for the compilation of multiple optimization results (either Boolean or cFL).
Author: M. Morris, T. Cokelaer
Maintainer: T. Cokelaer <cokelaer at ebi.ac.uk>
Citation (from within R,
enter citation("CNORfuzzy")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CNORfuzzy")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CNORfuzzy")
| R Script | Main vignette:Playing with networks using CNORfuzzyl | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Network, Software |
| Version | 1.14.0 |
| In Bioconductor since | BioC 2.11 (R-2.15) (4 years) |
| License | GPL-2 |
| Depends | R (>= 2.15.0), CellNOptR(>= 1.4.0), nloptr (>= 0.8.5) |
| Imports | |
| LinkingTo | |
| Suggests | xtable, Rgraphviz, RUnit, BiocGenerics |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | CNORfuzzy_1.14.0.tar.gz |
| Windows Binary | CNORfuzzy_1.14.0.zip (32- & 64-bit) |
| Mac OS X 10.9 (Mavericks) | CNORfuzzy_1.14.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/CNORfuzzy/tree/release-3.3 |
| Package Short Url | http://bioconductor.org/packages/CNORfuzzy/ |
| Package Downloads Report | Download Stats |
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