To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("EBSEA")

In most cases, you don't need to download the package archive at all.

EBSEA

This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see EBSEA.

Exon Based Strategy for Expression Analysis of genes

Bioconductor version: 3.3

Calculates differential expression of genes based on exon counts of genes obtained from RNA-seq sequencing data.

Author: Arfa Mehmood, Asta Laiho, Laura L. Elo

Maintainer: Arfa Mehmood <arfa.mehmood at utu.fi>

Citation (from within R, enter citation("EBSEA")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("EBSEA")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBSEA")

PDF	R Script	EBSEA: Exon Based Strategy for Expression Analysis of genes
PDF		Reference Manual

biocViews	DifferentialExpression, GeneExpression, Sequencing, Software
Version	1.0.0
In Bioconductor since	BioC 3.3 (R-3.3) (< 6 months)
License	GPL-2
Depends
Imports	edgeR, limma, gtools, graphics, stats
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Build Report

Follow Installation instructions to use this package in your R session.

Package Source	EBSEA_1.0.0.tar.gz
Windows Binary	EBSEA_1.0.0.zip
Mac OS X 10.9 (Mavericks)	EBSEA_1.0.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/EBSEA/tree/release-3.3
Package Short Url	http://bioconductor.org/packages/EBSEA/
Package Downloads Report	Download Stats

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