To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GMRP")
In most cases, you don't need to download the package archive at all.
GMRP
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see GMRP.
GWAS-based Mendelian Randomization and Path Analyses
Bioconductor version: 3.3
Perform Mendelian randomization analysis of multiple SNPs to determine risk factors causing disease of study and to exclude confounding variabels and perform path analysis to construct path of risk factors to the disease.
Author: Yuan-De Tan and Dajiang Liu
Maintainer: Yuan-De Tan <tanyuande at gmail.com>
Citation (from within R,
enter citation("GMRP")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GMRP")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GMRP")
| R Script | Causal Effect Analysis of Risk Factors for Disease with the "GMRP" package | |
| Reference Manual |
Details
| biocViews | Regression, SNP, Sequencing, Software |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (< 6 months) |
| License | GPL (>= 2) |
| Depends | R (>= 3.3.0), stats, utils, graphics, grDevices, diagram, plotrix, base, GenomicRanges |
| Imports | |
| LinkingTo | |
| Suggests | BiocStyle, BiocGenerics, VariantAnnotation |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | GMRP_1.0.0.tar.gz |
| Windows Binary | GMRP_1.0.0.zip |
| Mac OS X 10.9 (Mavericks) | GMRP_1.0.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/GMRP/tree/release-3.3 |
| Package Short Url | http://bioconductor.org/packages/GMRP/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
