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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MLInterfaces")
In most cases, you don't need to download the package archive at all.
MLInterfaces
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see MLInterfaces.
Uniform interfaces to R machine learning procedures for data in Bioconductor containers
Bioconductor version: 3.3
This package provides uniform interfaces to machine learning code for data in R and Bioconductor containers.
Author: Vince Carey <stvjc at channing.harvard.edu>, Robert Gentleman, Jess Mar, and contributions from Jason Vertrees <jv at cs.dartmouth.edu> and Laurent Gatto <lg390 at cam.ac.uk>
Maintainer: V. Carey <stvjc at channing.harvard.edu>
Citation (from within R,
enter citation("MLInterfaces")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MLInterfaces")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MLInterfaces")
| R Script | A machine learning tutorial: applications of the Bioconductor MLInterfaces package to expression and ChIP-Seq data | |
| R Script | MLInterfaces Computer Cluster | |
| R Script | MLInterfaces devel for schema-based MLearn | |
| R Script | MLInterfaces Primer | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Classification, Clustering, Software |
| Version | 1.52.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 11.5 years) |
| License | LGPL |
| Depends | R (>= 2.9), methods, BiocGenerics(>= 0.13.11), Biobase, annotate, cluster |
| Imports | gdata, pls, sfsmisc, MASS, rpart, rda, genefilter, fpc, ggvis, shiny, rgl, gbm, RColorBrewer, hwriter, threejs (>= 0.2.2), mlbench, stats4 |
| LinkingTo | |
| Suggests | class, e1071, ipred, randomForest, gpls, pamr, nnet, ALL, hgu95av2.db, som, hu6800.db, lattice, caret (>= 5.07), golubEsets, ada, keggorthology, kernlab, mboost, party |
| SystemRequirements | |
| Enhances | parallel |
| URL | |
| Depends On Me | a4Classif, pRoloc, SigCheck |
| Imports Me | |
| Suggests Me | BiocCaseStudies |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | MLInterfaces_1.52.0.tar.gz |
| Windows Binary | MLInterfaces_1.52.0.zip |
| Mac OS X 10.9 (Mavericks) | MLInterfaces_1.52.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/MLInterfaces/tree/release-3.3 |
| Package Short Url | http://bioconductor.org/packages/MLInterfaces/ |
| Package Downloads Report | Download Stats |
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