To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("MSGFplus")
In most cases, you don't need to download the package archive at all.
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see MSGFplus.
Bioconductor version: 3.3
This package contains function to perform peptide identification using MS-GF+
Author: Thomas Lin Pedersen
Maintainer: Thomas Lin Pedersen <thomasp85 at gmail.com>
Citation (from within R,
enter citation("MSGFplus")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("MSGFplus")
HTML | R Script | Using MSGFgui |
Reference Manual | ||
Text | NEWS |
biocViews | MassSpectrometry, Proteomics, Software |
Version | 1.6.2 |
In Bioconductor since | BioC 3.0 (R-3.1) (2 years) |
License | GPL (>= 2) |
Depends | methods |
Imports | mzID |
LinkingTo | |
Suggests | gWidgets, knitr, testthat |
SystemRequirements | Java (>= 1.7) |
Enhances | |
URL | |
Depends On Me | |
Imports Me | MSGFgui |
Suggests Me | RforProteomics |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | MSGFplus_1.6.2.tar.gz |
Windows Binary | MSGFplus_1.6.2.zip |
Mac OS X 10.9 (Mavericks) | MSGFplus_1.6.2.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/MSGFplus/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/MSGFplus/ |
Package Downloads Report | Download Stats |
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