To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dualKS")
In most cases, you don't need to download the package archive at all.
dualKS
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see dualKS.
Dual KS Discriminant Analysis and Classification
Bioconductor version: 3.3
This package implements a Kolmogorov Smirnov rank-sum based algorithm for training (i.e. discriminant analysis--identification of genes that discriminate between classes) and classification of gene expression data sets. One of the chief strengths of this approach is that it is amenable to the "multiclass" problem. That is, it can discriminate between more than 2 classes.
Author: Eric J. Kort, Yarong Yang
Maintainer: Eric J. Kort <ericjkort at gmail.com>, Yarong Yang <yarong.yang at ndsu.edu>
Citation (from within R,
enter citation("dualKS")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dualKS")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("dualKS")
| R Script | dualKS.pdf | |
| Reference Manual |
Details
| biocViews | Classification, Microarray, Software |
| Version | 1.32.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (8 years) |
| License | LGPL (>= 2.0) |
| Depends | R (>= 2.6.0), Biobase(>= 1.15.0), affy, methods |
| Imports | graphics |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | dualKS_1.32.0.tar.gz |
| Windows Binary | dualKS_1.32.0.zip |
| Mac OS X 10.9 (Mavericks) | dualKS_1.32.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/dualKS/tree/release-3.3 |
| Package Short Url | http://bioconductor.org/packages/dualKS/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
