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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("fastLiquidAssociation")
In most cases, you don't need to download the package archive at all.
fastLiquidAssociation
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see fastLiquidAssociation.
functions for genome-wide application of Liquid Association
Bioconductor version: 3.3
This package extends the function of the LiquidAssociation package for genome-wide application. It integrates a screening method into the LA analysis to reduce the number of triplets to be examined for a high LA value and provides code for use in subsequent significance analyses.
Author: Tina Gunderson
Maintainer: Tina Gunderson <gunderson.tina at gmail.com>
Citation (from within R,
enter citation("fastLiquidAssociation")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("fastLiquidAssociation")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("fastLiquidAssociation")
| R Script | fastLiquidAssociation Vignette | |
| Reference Manual |
Details
| biocViews | CellBiology, GeneExpression, Genetics, Pathways, Software |
| Version | 1.8.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) (2.5 years) |
| License | GPL-2 |
| Depends | methods, LiquidAssociation, parallel, stats, Hmisc |
| Imports | WGCNA |
| LinkingTo | |
| Suggests | GOstats, yeastCC, org.Sc.sgd.db |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | fastLiquidAssociation_1.8.0.tar.gz |
| Windows Binary | fastLiquidAssociation_1.8.0.zip |
| Mac OS X 10.9 (Mavericks) | fastLiquidAssociation_1.8.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/fastLiquidAssociation/tree/release-3.3 |
| Package Short Url | http://bioconductor.org/packages/fastLiquidAssociation/ |
| Package Downloads Report | Download Stats |
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