To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowAI")
In most cases, you don't need to download the package archive at all.
flowAI
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see flowAI.
Automatic and interactive quality control for flow cytometry data
Bioconductor version: 3.3
The package is able to perform an automatic or interactive quality control on FCS data acquired using flow cytometry instruments. By evaluating three different properties: 1) flow rate, 2) signal acquisition, 3) dynamic range, the quality control enables the detection and removal of anomalies.
Author: Gianni Monaco, Hao Chen
Maintainer: Gianni Monaco <gianni at liverpool.ac.uk>
Citation (from within R,
enter citation("flowAI")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowAI")
Documentation
| HTML | R Script | Automatic and GUI methods to do quality control on Flow cytometry Data |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | BiomedicalInformatics, FlowCytometry, QualityControl, Software |
| Version | 1.2.9 |
| In Bioconductor since | BioC 3.3 (R-3.3) (< 6 months) |
| License | GPL |
| Depends | R (>= 3.2) |
| Imports | ggplot2, flowCore, plyr, changepoint, knitr, reshape2, RColorBrewer, scales |
| LinkingTo | |
| Suggests | testthat, shiny, rmarkdown |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | flowAI_1.2.9.tar.gz |
| Windows Binary | flowAI_1.2.9.zip |
| Mac OS X 10.9 (Mavericks) | flowAI_1.2.9.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/flowAI/tree/release-3.3 |
| Package Short Url | http://bioconductor.org/packages/flowAI/ |
| Package Downloads Report | Download Stats |
Documentation »
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