To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("geneplotter")
In most cases, you don't need to download the package archive at all.
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see geneplotter.
Bioconductor version: 3.3
Functions for plotting genomic data
Author: R. Gentleman, Biocore
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("geneplotter")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("geneplotter")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("geneplotter")
R Script | How to assemble a chromLocation object | |
R Script | Visualization of Microarray Data | |
Reference Manual | ||
Text | README | |
Text | NEWS |
biocViews | Software, Visualization |
Version | 1.50.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 11.5 years) |
License | Artistic-2.0 |
Depends | R (>= 2.10), methods, Biobase, BiocGenerics, lattice, annotate |
Imports | AnnotationDbi, graphics, grDevices, grid, RColorBrewer, stats, utils |
LinkingTo | |
Suggests | Rgraphviz, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | HD2013SGI, Hiiragi2013, HMMcopy, PGPC |
Imports Me | biocGraph, DESeq, DESeq2, DEXSeq, ENmix, EnrichmentBrowser, flowQ, IsoGeneGUI, JunctionSeq, MethylSeekR, RNAinteract, RNAither |
Suggests Me | AgiMicroRna, BiocCaseStudies, biocGraph, Category, chimera, GOstats, Single.mTEC.Transcriptomes |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | geneplotter_1.50.0.tar.gz |
Windows Binary | geneplotter_1.50.0.zip |
Mac OS X 10.9 (Mavericks) | geneplotter_1.50.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/geneplotter/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/geneplotter/ |
Package Downloads Report | Download Stats |
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