- Home
- Bioconductor 3.3
- Software Packages
- iterativeBMA
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("iterativeBMA")
In most cases, you don't need to download the package archive at all.
iterativeBMA
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see iterativeBMA.
The Iterative Bayesian Model Averaging (BMA) algorithm
Bioconductor version: 3.3
The iterative Bayesian Model Averaging (BMA) algorithm is a variable selection and classification algorithm with an application of classifying 2-class microarray samples, as described in Yeung, Bumgarner and Raftery (Bioinformatics 2005, 21: 2394-2402).
Author: Ka Yee Yeung, University of Washington, Seattle, WA, with contributions from Adrian Raftery and Ian Painter
Maintainer: Ka Yee Yeung <kayee at u.washington.edu>
Citation (from within R,
enter citation("iterativeBMA")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("iterativeBMA")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("iterativeBMA")
| R Script | The Iterative Bayesian Model Averaging Algorithm | |
| Reference Manual |
Details
| biocViews | Classification, Microarray, Software |
| Version | 1.30.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (8 years) |
| License | GPL (>= 2) |
| Depends | BMA, leaps, Biobase(>= 2.5.5) |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | http://faculty.washington.edu/kayee/research.html |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | iterativeBMA_1.30.0.tar.gz |
| Windows Binary | iterativeBMA_1.30.0.zip |
| Mac OS X 10.9 (Mavericks) | iterativeBMA_1.30.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/iterativeBMA/tree/release-3.3 |
| Package Short Url | http://bioconductor.org/packages/iterativeBMA/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
