To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("maPredictDSC")
In most cases, you don't need to download the package archive at all.
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see maPredictDSC.
Bioconductor version: 3.3
This package implements the classification pipeline of the best overall team (Team221) in the IMPROVER Diagnostic Signature Challenge. Additional functionality is added to compare 27 combinations of data preprocessing, feature selection and classifier types.
Author: Adi Laurentiu Tarca <atarca at med.wayne.edu>
Maintainer: Adi Laurentiu Tarca <atarca at med.wayne.edu>
Citation (from within R,
enter citation("maPredictDSC")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("maPredictDSC")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("maPredictDSC")
R Script | maPredictDSC | |
Reference Manual |
biocViews | Classification, Microarray, Software |
Version | 1.10.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (3 years) |
License | GPL-2 |
Depends | R (>= 2.15.0), MASS, affy, limma, gcrma, ROC, class, e1071, caret, hgu133plus2.db, ROCR, AnnotationDbi, LungCancerACvsSCCGEO |
Imports | |
LinkingTo | |
Suggests | parallel |
SystemRequirements | |
Enhances | |
URL | http://bioinformaticsprb.med.wayne.edu/maPredictDSC |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | maPredictDSC_1.10.0.tar.gz |
Windows Binary | maPredictDSC_1.10.0.zip |
Mac OS X 10.9 (Mavericks) | maPredictDSC_1.10.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/maPredictDSC/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/maPredictDSC/ |
Package Downloads Report | Download Stats |
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