To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("msmsEDA")

In most cases, you don't need to download the package archive at all.

msmsEDA

This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see msmsEDA.

Exploratory Data Analysis of LC-MS/MS data by spectral counts

Bioconductor version: 3.3

Exploratory data analysis to assess the quality of a set of LC-MS/MS experiments, and visualize de influence of the involved factors.

Author: Josep Gregori, Alex Sanchez, and Josep Villanueva

Maintainer: Josep Gregori <josep.gregori at gmail.com>

Citation (from within R, enter citation("msmsEDA")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("msmsEDA")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("msmsEDA")

PDF	R Script	msmsEDA: Batch effects detection in LC-MSMS experiments
PDF		Reference Manual

biocViews	MassSpectrometry, Proteomics, Software
Version	1.10.0
In Bioconductor since	BioC 2.13 (R-3.0) (3 years)
License	GPL-2
Depends	R (>= 3.0.1), MSnbase
Imports	MASS, gplots, RColorBrewer
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	msmsTests
Imports Me
Suggests Me	Harman, RforProteomics
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	msmsEDA_1.10.0.tar.gz
Windows Binary	msmsEDA_1.10.0.zip
Mac OS X 10.9 (Mavericks)	msmsEDA_1.10.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/msmsEDA/tree/release-3.3
Package Short Url	http://bioconductor.org/packages/msmsEDA/
Package Downloads Report	Download Stats

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