To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("pRolocGUI")
In most cases, you don't need to download the package archive at all.
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see pRolocGUI.
Bioconductor version: 3.3
The package pRolocGUI comprises functions to interactively visualise organelle (spatial) proteomics data on the basis of pRoloc, pRolocdata and shiny.
Author: Lisa M Breckels, Thomas Naake and Laurent Gatto
Maintainer: Laurent Gatto <lg390 at cam.ac.uk>, Lisa M Breckels <lms79 at cam.ac.uk>
Citation (from within R,
enter citation("pRolocGUI")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("pRolocGUI")
HTML | R Script | pRolocGUI - Interactive visualisation of spatial proteomics data |
Reference Manual | ||
Text | NEWS | |
Video | pRoloc, pRolocdata and pRolocGUI |
biocViews | GUI, Proteomics, Software, Visualization |
Version | 1.6.2 |
In Bioconductor since | BioC 3.0 (R-3.1) (2 years) |
License | GPL-2 |
Depends | R (>= 3.1.0), pRoloc(>= 1.11.1), MSnbase(>= 1.13.11), methods |
Imports | shiny (>= 0.9.1), scales, dplyr, DT, utils, graphics |
LinkingTo | |
Suggests | pRolocdata, knitr, BiocStyle, rmarkdown, devtools |
SystemRequirements | |
Enhances | |
URL | http://ComputationalProteomicsUnit.github.io/pRolocGUI/ |
BugReports | https://github.com/ComputationalProteomicsUnit/pRolocGUI/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | pRolocGUI_1.6.2.tar.gz |
Windows Binary | pRolocGUI_1.6.2.zip |
Mac OS X 10.9 (Mavericks) | pRolocGUI_1.6.2.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/pRolocGUI/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/pRolocGUI/ |
Package Downloads Report | Download Stats |
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