To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("pepStat")
In most cases, you don't need to download the package archive at all.
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see pepStat.
Bioconductor version: 3.3
Statistical analysis of peptide microarrays
Author: Raphael Gottardo, Gregory C Imholte, Renan Sauteraud, Mike Jiang
Maintainer: Gregory C Imholte <gimholte at uw.edu>
Citation (from within R,
enter citation("pepStat")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("pepStat")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pepStat")
R Script | Full peptide microarray analysis | |
Reference Manual |
biocViews | Microarray, Preprocessing, Software |
Version | 1.6.2 |
In Bioconductor since | BioC 3.0 (R-3.1) (2 years) |
License | Artistic-2.0 |
Depends | R (>= 3.0.0), Biobase, IRanges |
Imports | limma, fields, GenomicRanges, ggplot2, plyr, tools, methods, data.table |
LinkingTo | |
Suggests | pepDat, Pviz, knitr, shiny |
SystemRequirements | |
Enhances | |
URL | https://github.com/RGLab/pepStat |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | pepStat_1.6.2.tar.gz |
Windows Binary | pepStat_1.6.2.zip |
Mac OS X 10.9 (Mavericks) | pepStat_1.6.2.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/pepStat/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/pepStat/ |
Package Downloads Report | Download Stats |
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: