- Home
- Bioconductor 3.3
- Annotation Packages
- BSgenome.Vvinifera.URGI.IGGP8X
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Vvinifera.URGI.IGGP8X")
In most cases, you don't need to download the package archive at all.
BSgenome.Vvinifera.URGI.IGGP8X
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Vvinifera.URGI.IGGP8X.
Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (IGGP version 8X)
Bioconductor version: 3.3
Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (derived from Pinot Noir and close to homozygosity after 6-9 rounds of selfing) as assembled by the IGGP (version 8X) and available at the URGI (INRA). More details in Jaillon et al (Nature, 2007).
Author: Timothee Flutre [cre,aut]
Maintainer: Timothee Flutre <timothee.flutre at supagro.inra.fr>
Citation (from within R,
enter citation("BSgenome.Vvinifera.URGI.IGGP8X")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Vvinifera.URGI.IGGP8X")
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, BSgenome, Genetics, Vitis_vinifera |
| Version | 0.1 |
| License | CC0 |
| Depends | BSgenome(>= 1.38.0) |
| Imports | BSgenome |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | BSgenome.Vvinifera.URGI.IGGP8X_0.1.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Package Short Url | http://bioconductor.org/packages/BSgenome.Vvinifera.URGI.IGGP8X/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
