AGDEX

DOI: 10.18129/B9.bioc.AGDEX    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see AGDEX.

Agreement of Differential Expression Analysis

Bioconductor version: 3.8

A tool to evaluate agreement of differential expression for cross-species genomics

Author: Stan Pounds <stanley.pounds at stjude.org>; Cuilan Lani Gao <cuilan.gao at stjude.org>

Maintainer: Cuilan lani Gao <cuilan.gao at stjude.org>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("AGDEX")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AGDEX")

 

PDF	R Script	AGDEX.pdf
PDF		Reference Manual

Details

biocViews	GeneExpression, Genetics, Microarray, Software
Version	1.30.0
In Bioconductor since	BioC 2.9 (R-2.14) (7.5 years)
License	GPL Version 2 or later
Depends	R (>= 2.10), Biobase, GSEABase
Imports	stats
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	AGDEX_1.30.0.tar.gz
Windows Binary	AGDEX_1.30.0.zip
Mac OS X 10.11 (El Capitan)	AGDEX_1.30.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/AGDEX
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/AGDEX
Package Short Url	http://bioconductor.org/packages/AGDEX/
Package Downloads Report	Download Stats