ENVISIONQuery

DOI: 10.18129/B9.bioc.ENVISIONQuery    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see ENVISIONQuery.

Retrieval from the ENVISION bioinformatics data portal into R

Bioconductor version: 3.8

Tools to retrieve data from ENVISION, the Database for Annotation, Visualization and Integrated Discovery portal

Author: Alex Lisovich, Roger Day

Maintainer: Alex Lisovich <all67 at pitt.edu>, Roger Day <day01 at pitt.edu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("ENVISIONQuery")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ENVISIONQuery")

 

PDF	R Script	An R Package for retrieving data from EnVision into R objects.
PDF		Reference Manual

Details

biocViews	Annotation, Software
Version	1.30.0
In Bioconductor since	BioC 2.8 (R-2.13) (8 years)
License	GPL-2
Depends	rJava, XML, utils
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	IdMappingRetrieval
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ENVISIONQuery_1.30.0.tar.gz
Windows Binary	ENVISIONQuery_1.30.0.zip
Mac OS X 10.11 (El Capitan)	ENVISIONQuery_1.30.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ENVISIONQuery
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ENVISIONQuery
Package Short Url	http://bioconductor.org/packages/ENVISIONQuery/
Package Downloads Report	Download Stats