FlowRepositoryR

DOI: 10.18129/B9.bioc.FlowRepositoryR    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see FlowRepositoryR.

FlowRepository R Interface

Bioconductor version: 3.8

This package provides an interface to search and download data and annotations from FlowRepository (flowrepository.org). It uses the FlowRepository programming interface to communicate with a FlowRepository server.

Author: Josef Spidlen [aut, cre]

Maintainer: Josef Spidlen <jspidlen at gmail.com>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("FlowRepositoryR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FlowRepositoryR")

 

PDF	R Script	FlowRepository R Interface
PDF		Reference Manual
Text		NEWS

Details

biocViews	FlowCytometry, ImmunoOncology, Infrastructure, Software
Version	1.14.1
In Bioconductor since	BioC 3.1 (R-3.2) (4 years)
License	Artistic-2.0
Depends	R (>= 3.2)
Imports	XML, RCurl, tools, utils, jsonlite
LinkingTo
Suggests	RUnit, BiocGenerics, flowCore, methods
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	flowQB
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	FlowRepositoryR_1.14.1.tar.gz
Windows Binary	FlowRepositoryR_1.14.1.zip
Mac OS X 10.11 (El Capitan)	FlowRepositoryR_1.14.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/FlowRepositoryR
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/FlowRepositoryR
Package Short Url	http://bioconductor.org/packages/FlowRepositoryR/
Package Downloads Report	Download Stats