This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see MCRestimate.
Bioconductor version: 3.8
This package includes a function for combining preprocessing and classification methods to calculate misclassification errors
Author: Marc Johannes, Markus Ruschhaupt, Holger Froehlich, Ulrich Mansmann, Andreas Buness, Patrick Warnat, Wolfgang Huber, Axel Benner, Tim Beissbarth
Maintainer: Marc Johannes <m.johannes at dkfz.de>
Citation (from within R,
enter citation("MCRestimate")
):
To install this package, start R (version "3.5") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("MCRestimate")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MCRestimate")
R Script | HOW TO use MCRestimate | |
Reference Manual |
biocViews | Classification, Software |
Version | 2.38.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 14 years) |
License | GPL (>= 2) |
Depends | R (>= 2.7.2), golubEsets(>= 1.4.6) |
Imports | e1071 (>= 1.5-12), pamr (>= 1.22), randomForest (>= 3.9-6), RColorBrewer (>= 0.1-3), Biobase(>= 2.5.5), graphics, grDevices, stats, utils |
LinkingTo | |
Suggests | xtable (>= 1.2-1), ROC(>= 1.8.0), genefilter(>= 1.12.0), gpls(>= 1.6.0) |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | MCRestimate_2.38.0.tar.gz |
Windows Binary | MCRestimate_2.38.0.zip |
Mac OS X 10.11 (El Capitan) | MCRestimate_2.38.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/MCRestimate |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MCRestimate |
Package Short Url | http://bioconductor.org/packages/MCRestimate/ |
Package Downloads Report | Download Stats |
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