MGFR

DOI: 10.18129/B9.bioc.MGFR    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see MGFR.

Marker Gene Finder in RNA-seq data

Bioconductor version: 3.8

The package is designed to detect marker genes from RNA-seq data.

Author: Khadija El Amrani

Maintainer: Khadija El Amrani <khadija.el-amrani at charite.de>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("MGFR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MGFR")

 

PDF	R Script	Using MGFR
PDF		Reference Manual
Text		NEWS

Details

biocViews	GeneExpression, Genetics, ImmunoOncology, RNASeq, Software
Version	1.8.1
In Bioconductor since	BioC 3.4 (R-3.3) (2.5 years)
License	GPL-3
Depends	R (>= 3.3)
Imports	biomaRt, annotate
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	sampleClassifier
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MGFR_1.8.1.tar.gz
Windows Binary	MGFR_1.8.1.zip
Mac OS X 10.11 (El Capitan)	MGFR_1.8.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MGFR
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MGFR
Package Short Url	http://bioconductor.org/packages/MGFR/
Package Downloads Report	Download Stats