MSstatsQCgui

DOI: 10.18129/B9.bioc.MSstatsQCgui    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see MSstatsQCgui.

A graphical user interface for MSstatsQC package

Bioconductor version: 3.8

MSstatsQCgui is a Shiny app which provides longitudinal system suitability monitoring and quality control tools for proteomic experiments.

Author: Eralp Dogu [aut, cre], Sara Taheri [aut], Olga Vitek [aut]

Maintainer: Eralp Dogu <eralp.dogu at gmail.com>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("MSstatsQCgui")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MSstatsQCgui")

 

HTML	R Script	MSstatsQCgui
PDF		Reference Manual
Text		NEWS

Details

biocViews	GUI, ImmunoOncology, MassSpectrometry, Proteomics, QualityControl, Software
Version	1.2.1
In Bioconductor since	BioC 3.7 (R-3.5) (1 year)
License	Artistic License 2.0
Depends
Imports	shiny, MSstatsQC, ggExtra, gridExtra, plotly, dplyr, RecordLinkage, grid
LinkingTo
Suggests	knitr
SystemRequirements
Enhances
URL	http://msstats.org/msstatsqc
BugReports	https://groups.google.com/forum/#!forum/msstatsqc
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MSstatsQCgui_1.2.1.tar.gz
Windows Binary	MSstatsQCgui_1.2.1.zip
Mac OS X 10.11 (El Capitan)	MSstatsQCgui_1.2.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MSstatsQCgui
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MSstatsQCgui
Package Short Url	http://bioconductor.org/packages/MSstatsQCgui/
Package Downloads Report	Download Stats