Rdisop

DOI: 10.18129/B9.bioc.Rdisop    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see Rdisop.

Decomposition of Isotopic Patterns

Bioconductor version: 3.8

Identification of metabolites using high precision mass spectrometry. MS Peaks are used to derive a ranked list of sum formulae, alternatively for a given sum formula the theoretical isotope distribution can be calculated to search in MS peak lists.

Author: Anton Pervukhin <apervukh at minet.uni-jena.de>, Steffen Neumann <sneumann at ipb-halle.de>

Maintainer: Steffen Neumann <sneumann at ipb-halle.de>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("Rdisop")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rdisop")

 

PDF		Molecule Identification with Rdisop
PDF		Reference Manual
Text		INSTALL

Details

biocViews	ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version	1.42.1
In Bioconductor since	BioC 2.2 (R-2.7) (11 years)
License	GPL-2
Depends	R (>= 2.0.0), RcppClassic
Imports
LinkingTo	RcppClassic, Rcpp
Suggests	RUnit
SystemRequirements	None
Enhances
URL	https://github.com/sneumann/Rdisop
BugReports	https://github.com/sneumann/Rdisop/issues/new
Depends On Me
Imports Me
Suggests Me	MSnbase, RforProteomics
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Rdisop_1.42.1.tar.gz
Windows Binary	Rdisop_1.42.1.zip
Mac OS X 10.11 (El Capitan)	Rdisop_1.42.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Rdisop
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Rdisop
Package Short Url	http://bioconductor.org/packages/Rdisop/
Package Downloads Report	Download Stats