This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see SVM2CRM.
Bioconductor version: 3.8
Detection of cis-regulatory elements using svm implemented in LiblineaR.
Author: Guidantonio Malagoli Tagliazucchi <malagoli at ingm.org>
Maintainer: Guidantonio Malagoli Tagliazucchi <guidantonio.malagolitagliazucchi at unimore.it>
Citation (from within R,
enter citation("SVM2CRM")
):
To install this package, start R (version "3.5") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("SVM2CRM")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SVM2CRM")
R Script | The \Rpackage{SVM2CRM} Package | |
Reference Manual | ||
Text | README | |
Text | NEWS |
biocViews | ChIPSeq, ChipOnChip, Preprocessing, Software, SupportVectorMachine |
Version | 1.14.0 |
In Bioconductor since | BioC 3.1 (R-3.2) (4 years) |
License | GPL-3 |
Depends | R (>= 3.2.0), LiblineaR, SVM2CRMdata |
Imports | AnnotationDbi, mclust, GenomicRanges, IRanges, zoo, squash, pls, rtracklayer, ROCR, verification |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | SVM2CRM_1.14.0.tar.gz |
Windows Binary | SVM2CRM_1.14.0.zip |
Mac OS X 10.11 (El Capitan) | SVM2CRM_1.14.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/SVM2CRM |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SVM2CRM |
Package Short Url | http://bioconductor.org/packages/SVM2CRM/ |
Package Downloads Report | Download Stats |
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