dualKS

DOI: 10.18129/B9.bioc.dualKS    

This package is for version 3.8 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see dualKS.

Dual KS Discriminant Analysis and Classification

Bioconductor version: 3.8

This package implements a Kolmogorov Smirnov rank-sum based algorithm for training (i.e. discriminant analysis--identification of genes that discriminate between classes) and classification of gene expression data sets. One of the chief strengths of this approach is that it is amenable to the "multiclass" problem. That is, it can discriminate between more than 2 classes.

Author: Eric J. Kort, Yarong Yang

Maintainer: Eric J. Kort <ericjkort at gmail.com>, Yarong Yang <yarong.yang at ndsu.edu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("dualKS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("dualKS")

 

PDF	R Script	dualKS.pdf
PDF		Reference Manual

Details

biocViews	Classification, Microarray, Software
Version	1.42.0
In Bioconductor since	BioC 2.3 (R-2.8) (10.5 years)
License	LGPL (>= 2.0)
Depends	R (>= 2.6.0), Biobase(>= 1.15.0), affy, methods
Imports	graphics
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	dualKS_1.42.0.tar.gz
Windows Binary	dualKS_1.42.0.zip
Mac OS X 10.11 (El Capitan)	dualKS_1.42.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/dualKS
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/dualKS
Package Short Url	http://bioconductor.org/packages/dualKS/
Package Downloads Report	Download Stats