iBMQ

DOI: 10.18129/B9.bioc.iBMQ    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see iBMQ.

integrated Bayesian Modeling of eQTL data

Bioconductor version: 3.8

integrated Bayesian Modeling of eQTL data

Author: Marie-Pier Scott-Boyer and Greg Imholte

Maintainer: Greg Imholte <gimholte at uw.edu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("iBMQ")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iBMQ")

 

PDF	R Script	iBMQ: An Integrated Hierarchical Bayesian Model for Multivariate eQTL Mapping
PDF		Reference Manual

Details

biocViews	GeneExpression, Microarray, Preprocessing, SNP, Software
Version	1.22.0
In Bioconductor since	BioC 2.12 (R-3.0) (6 years)
License	Artistic-2.0
Depends	R (>= 2.15.0), Biobase(>= 2.16.0), ggplot2 (>= 0.9.2)
Imports
LinkingTo
Suggests
SystemRequirements	GSL and OpenMP
Enhances
URL	http://www.rglab.org
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	iBMQ_1.22.0.tar.gz
Windows Binary	iBMQ_1.22.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/iBMQ
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/iBMQ
Package Short Url	http://bioconductor.org/packages/iBMQ/
Package Downloads Report	Download Stats