This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see metaMS.
Bioconductor version: 3.8
MS-based metabolomics data processing and compound annotation pipeline.
Author: Ron Wehrens [aut, cre] (author of GC-MS part), Pietro Franceschi [aut] (author of LC-MS part), Nir Shahaf [ctb], Matthias Scholz [ctb], Georg Weingart [ctb] (development of GC-MS approach), Elisabete Carvalho [ctb] (testing and feedback of GC-MS pipeline)
Maintainer: Ron Wehrens <ron.wehrens at gmail.com>
Citation (from within R,
enter citation("metaMS")
):
To install this package, start R (version "3.5") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("metaMS")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("metaMS")
R Script | runGC | |
R Script | runLC | |
Reference Manual | ||
Text | NEWS |
biocViews | ImmunoOncology, MassSpectrometry, Metabolomics, Software |
Version | 1.18.1 |
In Bioconductor since | BioC 2.14 (R-3.1) (5 years) |
License | GPL (>= 2) |
Depends | R (>= 2.10), methods, CAMERA, xcms(>= 1.35) |
Imports | Matrix, tools, robustbase, BiocGenerics |
LinkingTo | |
Suggests | metaMSdata, RUnit |
SystemRequirements | |
Enhances | |
URL | https://github.com/rwehrens/metaMS |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | metaMS_1.18.1.tar.gz |
Windows Binary | metaMS_1.18.1.zip |
Mac OS X 10.11 (El Capitan) | metaMS_1.18.1.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/metaMS |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/metaMS |
Package Short Url | http://bioconductor.org/packages/metaMS/ |
Package Downloads Report | Download Stats |
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