plateCore

DOI: 10.18129/B9.bioc.plateCore    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see plateCore.

Statistical tools and data structures for plate-based flow cytometry

Bioconductor version: 3.8

Provides basic S4 data structures and routines for analyzing plate based flow cytometry data.

Author: Errol Strain, Florian Hahne, and Perry Haaland

Maintainer: Errol Strain <estrain at gmail.com>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("plateCore")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("plateCore")

 

PDF	R Script	An R Package for Analysis of High Throughput Flow Cytometry Data
PDF		Reference Manual

Details

biocViews	CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software
Version	1.40.1
In Bioconductor since	BioC 2.5 (R-2.10) (9.5 years)
License	Artistic-2.0
Depends	R (>= 2.10), flowCore, flowViz, lattice, latticeExtra
Imports	Biobase, flowCore, graphics, grDevices, lattice, MASS, methods, robustbase, stats, utils, flowStats
LinkingTo
Suggests	gplots
SystemRequirements
Enhances
URL	http://www.bioconductor.org
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	plateCore_1.40.1.tar.gz
Windows Binary	plateCore_1.40.1.zip
Mac OS X 10.11 (El Capitan)	plateCore_1.40.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/plateCore
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/plateCore
Package Short Url	http://bioconductor.org/packages/plateCore/
Package Downloads Report	Download Stats