profileScoreDist

DOI: 10.18129/B9.bioc.profileScoreDist    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see profileScoreDist.

Profile score distributions

Bioconductor version: 3.8

Regularization and score distributions for position count matrices.

Author: Paal O. Westermark

Maintainer: Paal O. Westermark <pal-olof.westermark at charite.de>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("profileScoreDist")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("profileScoreDist")

 

PDF	R Script	Using profileScoreDist
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	GeneRegulation, Software, StatisticalMethod
Version	1.10.0
In Bioconductor since	BioC 3.3 (R-3.3) (3 years)
License	MIT + file LICENSE
Depends	R (>= 3.3)
Imports	Rcpp, BiocGenerics, methods, graphics
LinkingTo	Rcpp
Suggests	BiocStyle, knitr, MotifDb
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	profileScoreDist_1.10.0.tar.gz
Windows Binary	profileScoreDist_1.10.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	profileScoreDist_1.10.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/profileScoreDist
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/profileScoreDist
Package Short Url	http://bioconductor.org/packages/profileScoreDist/
Package Downloads Report	Download Stats