org.Mm.eg.db

DOI: 10.18129/B9.bioc.org.Mm.eg.db    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see org.Mm.eg.db.

Genome wide annotation for Mouse

Bioconductor version: 3.8

Genome wide annotation for Mouse, primarily based on mapping using Entrez Gene identifiers.

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("org.Mm.eg.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	AnnotationData, Mus_musculus, OrgDb, mouseLLMappings
Version	3.7.0
License	Artistic-2.0
Depends	R (>= 2.7.0), methods, AnnotationDbi(>= 1.43.1)
Imports	methods, AnnotationDbi
LinkingTo
Suggests	DBI, annotate, RUnit
SystemRequirements
Enhances
URL
Depends On Me	annotation, chipseqDB, clariomsmousehttranscriptcluster.db, clariomsmousetranscriptcluster.db, illuminaMousev1.db, illuminaMousev1p1.db, illuminaMousev2.db, lumiMouseAll.db, m10kcod.db, m20kcod.db, mgu74a.db, mgu74av2.db, mgu74b.db, mgu74bv2.db, mgu74c.db, mgu74cv2.db, mguatlas5k.db, mgug4104a.db, mgug4120a.db, mgug4121a.db, mgug4122a.db, mi16cod.db, mm24kresogen.db, MmAgilentDesign026655.db, moe430a.db, moe430b.db, moex10stprobeset.db, moex10sttranscriptcluster.db, mogene10stprobeset.db, mogene10sttranscriptcluster.db, mogene11stprobeset.db, mogene11sttranscriptcluster.db, mogene20stprobeset.db, mogene20sttranscriptcluster.db, mogene21stprobeset.db, mogene21sttranscriptcluster.db, mouse4302.db, mouse430a2.db, mpedbarray.db, mta10probeset.db, mta10transcriptcluster.db, mu11ksuba.db, mu11ksubb.db, Mu15v1.db, mu19ksuba.db, mu19ksubb.db, mu19ksubc.db, Mu22v3.db, Mus.musculus, mwgcod.db, nugomm1a520177.db, RnaSeqGeneEdgeRQL, simpleSingleCell
Imports Me	artMS, cellity, chimeraviz, chipenrich, debrowser, eegc, EGSEA, PathwaySplice, Rmmquant, rTRMui, scPipe, SEPA, tenXplore
Suggests Me	annotate, annotatr, CAGEfightR, CellTrails, chipenrich.data, compEpiTools, csaw, FELLA, fgsea, gCMAPWeb, gCrisprTools, GeneAnswers, geneXtendeR, GenomicFeatures, girafe, HTSanalyzeR, InPAS, iSEE, isomiRs, MAGeCKFlute, MLP, MmPalateMiRNA, ontoProc, Organism.dplyr, pathview, Pigengene, RCAS, ReportingTools, restfulSE, RnBeads, RpsiXML, rTRM, scran, singleCellTK, TimeSeriesExperiment
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	org.Mm.eg.db_3.7.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url	http://bioconductor.org/packages/org.Mm.eg.db/
Package Downloads Report	Download Stats