dyebiasexamples

DOI: 10.18129/B9.bioc.dyebiasexamples    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see dyebiasexamples.

Example data for the dyebias package, which implements the GASSCO method.

Bioconductor version: 3.8

Data for the dyebias package, consisting of 4 self-self hybrizations of self-spotted yeast slides, as well as data from Array Express accession E-MTAB-32

Author: Philip Lijnzaad and Thanasis Margaritis

Maintainer: Philip Lijnzaad <plijnzaad at gmail.com>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("dyebiasexamples")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual
Text		LICENSE

Details

biocViews	ArrayExpress, CGHData, ExperimentData, MicroarrayData, SAGEData, TwoChannelData
Version	1.22.0
License	GPL-3
Depends	R (>= 1.4.1), marray, GEOquery
Imports
LinkingTo
Suggests	dyebias, convert, Biobase
SystemRequirements
Enhances
URL	http://www.holstegelab.nl/publications/margaritis_lijnzaad
Depends On Me
Imports Me
Suggests Me	dyebias
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	dyebiasexamples_1.22.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/dyebiasexamples
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/dyebiasexamples
Package Short Url	http://bioconductor.org/packages/dyebiasexamples/
Package Downloads Report	Download Stats