minfiDataEPIC

DOI: 10.18129/B9.bioc.minfiDataEPIC    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see minfiDataEPIC.

Example data for the Illumina Methylation EPIC array

Bioconductor version: 3.8

Data from 3 technical replicates of the cell line GM12878 from the EPIC methylation array.

Author: Jean-Philippe Fortin, Kasper Daniel Hansen

Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("minfiDataEPIC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version	1.8.0
License	Artistic-2.0
Depends	R (>= 3.3), minfi(>= 1.21.2), IlluminaHumanMethylationEPICmanifest, IlluminaHumanMethylationEPICanno.ilm10b2.hg19
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	MethylAid, MethylAidData, minfi, REMP
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	minfiDataEPIC_1.8.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/minfiDataEPIC
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/minfiDataEPIC
Package Short Url	http://bioconductor.org/packages/minfiDataEPIC/
Package Downloads Report	Download Stats