msqc1

DOI: 10.18129/B9.bioc.msqc1    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see msqc1.

Sigma mix MSQC1 data

Bioconductor version: 3.8

The data set contains an eight technical replicate data set and a three replicate dilution series of the MS Qual/Quant QC Mix standard sample (Sigma-Aldrich, Buchs, Switzerland) measured on five different mass spec platforms at the Functional Genomics Center Zurich.

Author: Tobias Kockmann, Christian Trachsel, Christian Panse

Maintainer: Christian Panse <cp at fgcz.ethz.ch>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("msqc1")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("msqc1")

 

PDF	R Script	ASMS 2016 poster (in portrait) abstract ID number: 282492
HTML	R Script	Introducing msqc1 - A Mass Spec Data set for Targeted Proteomics Performance Evaluation
HTML	R Script	LC Observations - Retention Time Stability
PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentData, MassSpectrometryData, ReproducibleResearch
Version	1.10.0
License	GPL
Depends	R (>= 3.2), lattice, stats, utils
Imports
LinkingTo
Suggests	BiocStyle, knitr, testthat, specL
SystemRequirements
Enhances
URL	https://panoramaweb.org/labkey/MSQC1.url http://fgcz-bfabric.uzh.ch/bfabric/project.html?projectId=1959
Depends On Me
Imports Me
Suggests Me	specL
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	msqc1_1.10.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/msqc1
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/msqc1
Package Short Url	http://bioconductor.org/packages/msqc1/
Package Downloads Report	Download Stats