To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("cellHTS")
In most cases, you don't need to download the package archive at all.
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see cellHTS.
Bioconductor version: 3.3
Analysis of cell-based RNA interference screens.
Author: Wolfgang Huber <huber at ebi.ac.uk>, Ligia Bras <ligia at ebi.ac.uk>, Michael Boutros <m.boutros at dkfz.de>
Maintainer: Andrzej OleÅ› <andrzej.oles at embl.de>
Citation (from within R,
enter citation("cellHTS")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("cellHTS")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cellHTS")
R Script | Main vignette: End-to-end analysis of cell-based screens | |
R Script | Supplement: multi-channel assays | |
R Script | Supplement: two-way assays | |
Reference Manual |
biocViews | CellBasedAssays, Software, Visualization |
Version | 1.42.0 |
In Bioconductor since | BioC 1.8 (R-2.3) (10.5 years) |
License | Artistic-2.0 |
Depends | R (>= 2.10), grid |
Imports | Biobase, prada, RColorBrewer, genefilter |
LinkingTo | |
Suggests | Category, ggplot2, GO.db, gridBase, vsn(>= 2.0.35) |
SystemRequirements | |
Enhances | |
URL | http://www.dkfz.de/signaling http://www.ebi.ac.uk/huber |
Depends On Me | |
Imports Me | |
Suggests Me | prada |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | cellHTS_1.42.0.tar.gz |
Windows Binary | cellHTS_1.42.0.zip |
Mac OS X 10.9 (Mavericks) | cellHTS_1.42.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/cellHTS/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/cellHTS/ |
Package Downloads Report | Download Stats |
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