To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("prada")
In most cases, you don't need to download the package archive at all.
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see prada.
Bioconductor version: 3.3
Tools for analysing and navigating data from high-throughput phenotyping experiments based on cellular assays and fluorescent detection (flow cytometry (FACS), high-content screening microscopy).
Author: Florian Hahne <florian.hahne at novartis.com>, Wolfgang Huber <huber at ebi.ac.uk>, Markus Ruschhaupt, Joern Toedling <toedling at ebi.ac.uk>, Joseph Barry <joseph.barry at embl.de>
Maintainer: Florian Hahne <florian.hahne at novartis.com>
Citation (from within R,
enter citation("prada")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("prada")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("prada")
R Script | Combining prada output and cellHTS | |
R Script | Removal of contaminants from FACS data | |
Reference Manual |
biocViews | CellBasedAssays, Software, Visualization |
Version | 1.48.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 11.5 years) |
License | LGPL |
Depends | R (>= 2.10), Biobase, RColorBrewer, grid, methods, rrcov |
Imports | Biobase, BiocGenerics, graphics, grDevices, grid, MASS, methods, RColorBrewer, rrcov, stats4, utils |
LinkingTo | |
Suggests | cellHTS, tcltk |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | domainsignatures, facsDorit, RNAither |
Imports Me | cellHTS, cellHTS2 |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | prada_1.48.0.tar.gz |
Windows Binary | prada_1.48.0.zip (32- & 64-bit) |
Mac OS X 10.9 (Mavericks) | prada_1.48.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/prada/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/prada/ |
Package Downloads Report | Download Stats |
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