To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("rhdf5")
In most cases, you don't need to download the package archive at all.
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see rhdf5.
Bioconductor version: 3.3
This R/Bioconductor package provides an interface between HDF5 and R. HDF5's main features are the ability to store and access very large and/or complex datasets and a wide variety of metadata on mass storage (disk) through a completely portable file format. The rhdf5 package is thus suited for the exchange of large and/or complex datasets between R and other software package, and for letting R applications work on datasets that are larger than the available RAM.
Author: Bernd Fischer, Gregoire Pau
Maintainer: Bernd Fischer <b.fischer at dkfz.de>
Citation (from within R,
enter citation("rhdf5")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("rhdf5")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rhdf5")
R Script | rhdf5 | |
Reference Manual | ||
Text | NEWS |
biocViews | DataImport, Infrastructure, Software |
Version | 2.16.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 11.5 years) |
License | Artistic-2.0 |
Depends | methods |
Imports | zlibbioc |
LinkingTo | |
Suggests | bit64, BiocStyle |
SystemRequirements | GNU make |
Enhances | |
URL | |
Depends On Me | GENE.E, GSCA |
Imports Me | biomformat, diffHic, DmelSGI, DOQTL, GENE.E, h5vc, HDF5Array, IONiseR, scater |
Suggests Me | SummarizedExperiment |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | rhdf5_2.16.0.tar.gz |
Windows Binary | rhdf5_2.16.0.zip (32- & 64-bit) |
Mac OS X 10.9 (Mavericks) | rhdf5_2.16.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/rhdf5/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/rhdf5/ |
Package Downloads Report | Download Stats |
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: