This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see flowClust.
Bioconductor version: 3.8
Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.
Author: Raphael Gottardo <raph at stat.ubc.ca>, Kenneth Lo <c.lo at stat.ubc.ca>, Greg Finak <gfinak at fhcrc.org>
Maintainer: Greg Finak <gfinak at fhcrc.org>, Mike Jiang <wjiang2 at fhcrc.org>
Citation (from within R,
enter citation("flowClust")
):
To install this package, start R (version "3.5") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("flowClust")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowClust")
R Script | flowClust package | |
Reference Manual | ||
Text | README | |
Text | NEWS |
biocViews | Clustering, FlowCytometry, ImmunoOncology, Software, Visualization |
Version | 3.20.1 |
In Bioconductor since | BioC 2.2 (R-2.7) (11 years) |
License | Artistic-2.0 |
Depends | R (>= 2.5.0) |
Imports | BiocGenerics, methods, Biobase, graph, ellipse, flowViz, flowCore, clue, corpcor, mnormt |
LinkingTo | |
Suggests | testthat, flowWorkspace, flowWorkspaceData |
SystemRequirements | GNU make |
Enhances | |
URL | |
Depends On Me | flowMerge, flowTrans |
Imports Me | CONFESS, flowTrans, flowType, openCyto |
Suggests Me | BiocGenerics |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | flowClust_3.20.1.tar.gz |
Windows Binary | flowClust_3.20.1.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | flowClust_3.20.1.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/flowClust |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowClust |
Package Short Url | http://bioconductor.org/packages/flowClust/ |
Package Downloads Report | Download Stats |
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