TabulaMurisData

DOI: 10.18129/B9.bioc.TabulaMurisData    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see TabulaMurisData.

10x And SmartSeq2 Data From The Tabula Muris Consortium

Bioconductor version: 3.8

Access to processed 10x (droplet) and SmartSeq2 (on FACS-sorted cells) single-cell RNA-seq data from the Tabula Muris consortium (http://tabula-muris.ds.czbiohub.org/).

Author: Charlotte Soneson

Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("TabulaMurisData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TabulaMurisData")

 

HTML	R Script	Tabula Muris data
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	ExperimentData, RNASeqData, SingleCellData
Version	1.0.0
License	MIT + file LICENSE
Depends	R (>= 3.5)
Imports	ExperimentHub, utils
LinkingTo
Suggests	knitr, rmarkdown, BiocStyle, SingleCellExperiment, scran, scater, iSEE, testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	TabulaMurisData_1.0.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/TabulaMurisData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/TabulaMurisData
Package Short Url	http://bioconductor.org/packages/TabulaMurisData/
Package Downloads Report	Download Stats