yriMulti

DOI: 10.18129/B9.bioc.yriMulti    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see yriMulti.

support for expression, methylation, DHS, VCF for YRI

Bioconductor version: 3.8

expression, methylation, DHS for YRI

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("yriMulti")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("yriMulti")

 

PDF	R Script	yriMulti -- HapMap YRI population, multiassay interfaces
PDF		Reference Manual

Details

biocViews	ExperimentData
Version	0.12.0
License	Artistic-2.0
Depends	Homo.sapiens, geuvPack, MultiAssayExperiment(>= 1.3.14)
Imports	GenomicFiles(>= 1.13.6), VariantAnnotation(>= 1.23.1), gQTLBase, SummarizedExperiment, GenomicRanges, dsQTL, GenomeInfoDb
LinkingTo
Suggests	erma, BiocStyle, knitr, rmarkdown, gQTLstats(>= 1.9.2), doParallel, geuvPack, knitcitations, bibtex
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	yriMulti_0.12.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/yriMulti
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/yriMulti
Package Short Url	http://bioconductor.org/packages/yriMulti/
Package Downloads Report	Download Stats